Aegilops tauschii vs Hordeum vulgare ATAC Results

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Aegilops tauschii (Aegilops tauschii, ASM34733v1) and Hordeum vulgare (Hordeum vulgare, ASM32608v1) were aligned using the ATAC alignment algorithm (http://seqanswers.com/wiki/ATAC) in Ensembl Plants release 79. Aegilops tauschii was used as the reference species.

Results

Number of alignment blocks: 717,803

Genome coverage (bp) Coding exon coverage (bp)
Aegilops tauschii

Uncovered: 3,246,602,450 out of 3,313,764,331
Covered: 67,161,881 out of 3,313,764,331

Uncovered: 18,254,317 out of 40,847,881
Matches: 21,570,177 out of 40,847,881
Mismatches: 1,023,387 out of 40,847,881
Insertions: 0 out of 40,847,881

Hordeum vulgare

Uncovered: 3,978,138,970 out of 4,045,300,851
Covered: 67,161,881 out of 4,045,300,851

Uncovered: 6,963,412 out of 27,753,036
Matches: 19,891,424 out of 27,753,036
Mismatches: 898,200 out of 27,753,036
Insertions: 0 out of 27,753,036

Configuration parameters

No configuration parameters are available.